{ "_id": "6a4df9cde691af43f13deddf", "Package": "CEDMr", "Title": "Capability-Ecological Developmental Model (CEDM) Analysis", "Version": "0.1.0", "Authors@R": "person(\"Subir\", \"Hait\",\nemail = \"haitsubi@msu.edu\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0009-0004-9871-9677\"))", "Description": "Provides tools for implementing the Capability-Ecological\nDevelopmental Model (CEDM) in longitudinal and multilevel data.\nThe package supports estimation and interpretation of models\nexamining how socioeconomic status (SES), health indicators,\nand contextual factors jointly relate to academic outcomes.\nFunctionality includes: (1) classification of ecological\ncapability regimes (amplifying, neutral, compensatory); (2)\nestimation of moderated multilevel models with higher-order\ninteraction terms; (3) causal mediation analysis using doubly\nrobust estimation; (4) random-effects within-between (REWB)\ndecomposition; (5) nonlinear moderation using restricted cubic\nsplines; (6) clustering of longitudinal health trajectories;\nand (7) sensitivity analysis using the impact threshold for a\nconfounding variable (ITCV) and robustness-to-replacement (RIR)\nmeasures. The package is designed for use with general\nlongitudinal multilevel datasets.", "License": "MIT + file LICENSE", "URL": "https://github.com/causalfragility-lab/CEDMr", "BugReports": "https://github.com/causalfragility-lab/CEDMr/issues", "Encoding": "UTF-8", "Language": "en-US", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev", "Repository": "https://causalfragility-lab.r-universe.dev", "Date/Publication": "2026-04-01 14:24:27 UTC", "RemoteUrl": "https://github.com/causalfragility-lab/cedmr", "RemoteRef": "HEAD", "RemoteSha": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-08 07:15:13 UTC", "User": "root" }, "Author": "Subir Hait [aut, cre] (ORCID: )", "Maintainer": "Subir Hait ", "_user": "causalfragility-lab", "_type": "src", "_file": "CEDMr_0.1.0.tar.gz", "_fileid": "https://r2.ropensci.org/8a94619cf8fa65aa605a46806db563cda0090cdbf3ddcacc8e46a338b8659c89", "_filesize": 234099, "_sha256": "8a94619cf8fa65aa605a46806db563cda0090cdbf3ddcacc8e46a338b8659c89", "_expires": "2026-10-16T07:18:35.000Z", "_created": "2026-07-08T07:15:13.000Z", "_published": "2026-07-08T07:18:37.403Z", "_jobs": [ { "job": 85809650761, "time": 160, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8160938897" }, { "job": 85809650715, "time": 142, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8160932931" }, { "job": 85809650708, "time": 133, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "8160929578" }, { "job": 85809650737, "time": 95, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8160916877" }, { "job": 85808890336, "time": 268, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8160884493" }, { "job": 85809650723, "time": 163, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8160937121" }, { "job": 85809650762, "time": 79, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "8160912059" }, { "job": 85809650768, "time": 94, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "8160917719" }, { "job": 85809650763, "time": 92, "config": "windows-release", "r": "4.6.1", "check": "OK", "artifact": "8160916061" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688", "_status": "success", "_upstream": "https://github.com/causalfragility-lab/cedmr", "_commit": { "id": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "author": "Subir Hait <264290991+causalfragility-lab@users.noreply.github.com>", "committer": "Subir Hait <264290991+causalfragility-lab@users.noreply.github.com>", "message": "Update cran-comments.md for second resubmission\n", "time": 1775053467 }, "_maintainer": { "name": "Subir Hait", "email": "haitsubi@msu.edu", "login": "causalfragility-lab", "description": "", "uuid": 264290991 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "version": ">= 1.1.0", "role": "Imports" }, { "package": "ggplot2", "version": ">= 3.4.0", "role": "Imports" }, { "package": "lme4", "version": ">= 1.1-31", "role": "Imports" }, { "package": "magrittr", "version": ">= 2.0.0", "role": "Imports" }, { "package": "mediation", "version": ">= 4.5.0", "role": "Imports" }, { "package": "rlang", "version": ">= 1.1.0", "role": "Imports" }, { "package": "rms", "version": ">= 6.7-0", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "tidyr", "version": ">= 1.3.0", "role": "Imports" }, { "package": "cluster", "version": ">= 2.1.4", "role": "Suggests" }, { "package": "konfound", "version": ">= 0.4.0", "role": "Suggests" }, { "package": "mice", "version": ">= 3.16.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "causalfragility-lab", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-13", "n": 13 }, { "week": "2026-14", "n": 2 } ], "_tags": [], "_stars": 0, "_contributors": [ { "user": "causalfragility-lab", "count": 15, "uuid": 264290991 } ], "_userbio": { "uuid": 264290991, "type": "user", "name": "causalfragility-lab", "followers": 4 }, "_downloads": { "count": 467, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/CEDMr" }, "_devurl": "https://github.com/causalfragility-lab/cedmr", "_searchresults": 0, "_rbuild": "4.6.1", "_assets": [ "extra/CEDMr.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "LICENSE", "manual.pdf" ], "_homeurl": "https://github.com/causalfragility-lab/cedmr", "_realowner": "causalfragility-lab", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2026-04-08" } ], "_exports": [ "cedm_full_pipeline", "cedm_mediation", "cedm_production", "cedm_rewb", "cedm_sensitivity", "cedm_simulate", "cedm_spline_moderation", "cedm_trajectory", "classify_regime", "plot_cedm_interaction", "plot_regimes" ], "_help": [ { "page": "cedm_full_pipeline", "title": "Run the Full CEDM Analysis Pipeline", "topics": [ "cedm_full_pipeline" ] }, { "page": "cedm_mediation", "title": "CEDM Causal Mediation Analysis", "topics": [ "cedm_mediation" ] }, { "page": "cedm_production", "title": "Fit the CEDM Capability-Conversion Production Function", "topics": [ "cedm_production" ] }, { "page": "cedm_rewb", "title": "Random-Effects Within-Between (REWB) Decomposition", "topics": [ "cedm_rewb" ] }, { "page": "cedm_sensitivity", "title": "CEDM Sensitivity Analysis: Frank's ITCV and Robustness-to-Replacement (RIR)", "topics": [ "cedm_sensitivity" ] }, { "page": "cedm_simulate", "title": "Simulate Data Under CEDM Ecological Capability Regimes", "topics": [ "cedm_simulate" ] }, { "page": "cedm_spline_moderation", "title": "Nonlinear Moderation via Restricted Cubic Splines (CEDM Proposition 1 & 2)", "topics": [ "cedm_spline_moderation" ] }, { "page": "cedm_trajectory", "title": "Longitudinal Health Trajectory Clustering (CEDM Proposition 3)", "topics": [ "cedm_trajectory" ] }, { "page": "classify_regime", "title": "Classify Ecological Capability Regimes", "topics": [ "classify_regime" ] }, { "page": "plot_cedm_interaction", "title": "Plot CEDM Interaction: SES x Health by Regime", "topics": [ "plot_cedm_interaction" ] }, { "page": "plot_regimes", "title": "Plot Ecological Capability Regimes", "topics": [ "plot_regimes" ] } ], "_readme": "https://github.com/causalfragility-lab/cedmr/raw/HEAD/README.md", "_rundeps": [ "backports", "base64enc", "boot", "bslib", "cachem", "checkmate", "cli", "cluster", "codetools", "colorspace", "cpp11", "data.table", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "foreign", "Formula", "fs", "generics", "ggplot2", "glue", "gridExtra", "gtable", "highr", "Hmisc", "htmlTable", "htmltools", "htmlwidgets", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "lattice", "lifecycle", "lme4", "lpSolve", "magrittr", "MASS", "Matrix", "MatrixModels", "mediation", "memoise", "mime", "minqa", "multcomp", "mvtnorm", "nlme", "nloptr", "nnet", "pillar", "pkgconfig", "polspline", "purrr", "quantreg", "R6", "rappdirs", "rbibutils", "RColorBrewer", "Rcpp", "RcppEigen", "Rdpack", "reformulas", "rlang", "rmarkdown", "rms", "rpart", "rstudioapi", "S7", "sandwich", "sass", "scales", "SparseM", "stringi", "stringr", "survival", "TH.data", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "yaml", "zoo" ], "_score": 3, "_indexed": true, "_nocasepkg": "cedmr", "_universes": [ "causalfragility-lab" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-07-08T07:17:54.000Z", "distro": "resolute", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/407d20ad618fdc31fed64b059592cb351bee98d2d06ac602d3461260a2091fb0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.6.1", "os": "linux", "version": "0.1.0", "date": "2026-07-08T07:17:39.000Z", "distro": "resolute", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/77e7e16e742d0f4f9ab19f0ddff7263dcb78b7ece79723d22f717f80f24fca4e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-07-08T07:17:20.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/d8987b66a2815ea8b06d67f984877ea79398e35edbd958a786ea1712930cd2f2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.6.1", "os": "mac", "version": "0.1.0", "date": "2026-07-08T07:16:52.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/a48a0e03ffe14ab394c1db3c66fab02fe182984c4d9170433c21854fe5d4176f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-07-08T07:18:06.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/d2e63d2e77ca63b9ffbe106760305e2f5e0288c7ebc026280ef15b23b0413d6e", "status": "success", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-07-08T07:16:27.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/965423a1d80eeb7f6dba87733a9cf4861a4915ae3bc53b5712ca26c3e540e709", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-07-08T07:16:45.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/e0fb97aa80a7923b1da757fdef3380d92570422043f7a16b700f80c3f54491d1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" }, { "r": "4.6.1", "os": "win", "version": "0.1.0", "date": "2026-07-08T07:16:37.000Z", "commit": "451ab2cb5fe70aae81c3184b0eb1eeab53b599fa", "fileid": "https://r2.ropensci.org/aa82c206e1e3a42a5e7c9804b7dcafb13ec312e47af2c0c7d9f348a84ca10f9d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/causalfragility-lab/actions/runs/28924477688" } ] }